Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809274.1_cds_XP_016495680.1_9975
CDS Infomation

[gene=LOC107814744] [db_xref=GeneID:107814744] [protein=histone deacetylase 19-like] [protein_id=XP_016495680.1] [location=join(485..1012,2365..2805,3487..3717,4274..4341,4463..4520,5848..5916,6000..6101)] [gbkey=CDS]
Sequence

ATGGATACTGGAGGAAACTCCTTACCATCTGGTGCAGATGGTAAGAAGAGAAAAGTGAGT
TATTTCTATGATCCTGAAGTTGGCAATTACTATTATGGACAAGGCCACCCGATGAAGCCA
CATAGAATCCGTATGACACATGCTCTTCTTGCCCACTATGGTCTATTACAACATATGAAT
GTTCTGAAGCCAAATCCCGCTAGAGATAAGGATCTCTGCCGGTTTCATGCTGATGATTAT
GTTGCTTTCTTGAGAAACATAACCCCTGAGACACAACAAGATCAGCTGAGGCAGCTGAAG
AGGTTCAATGTTGGGGAAGACTGTCCAGTTTTTGATGGTCTTTATTCCTTCTGTCAAACC
TATGCTGGAGGTTCTGTTGGTGGGGCAGTTAAGTTAAACCATGGACACTGTGATATTGCC
GTAAACTGGGCTGGTGGATTACATCACGCCAAGAAATGTGAAGCTTCTGGTTTCTGCTAT
GTCAACGACATTGTGCTTGCCATTTTGGAGCTACTCAAAGTCCATGAGAGAGTTTTGTAT
GTGGATATTGATATCCATCACGGTGATGGTGTGGAGGAGGCTTTTTATACCACAGATAGG
GTCATGACAGTTTCCTTTCATAAATTTGGAGATTACTTTCCCGGTACAGGGGATGTACGT
GATATTGGATTTGGAAAGGGAAAATACTACTCTCTTAATGTTCCACTAGATGATGGAATT
GATGATGAGAGCTATCAGTCCCTCTTTAAGCCAATAATGGGCAAAGTGATGGAAGTTTTC
AAGCCTGGTGCTGTGGTCTTACAGTGCGGTGCAGATTCCTTATCTGGGGATAGGCTAGGC
TGCTTTAATCTCTCTATTAAAGGACATGCAGAATGTGTCAAATACATGAGGTCTTTCAAT
GTGCCTCTGCTGTTGCTTGGTGGAGGAGGCTACACAATACGTAATGTTGCTCGTTGCTGG
TGTTACGAAACAGGAGTTGCATTAGGTATAGAGCTTGAAGATAAGATGCCGCCACATGAA
TATTATGAATATTTTGGTCCAGATTATACCCTGCATGTTGCTCCAAGTAACATGGAGAAC
AAAAATTCTCGTCAGATTTTAGAAGATATAAGATCAAAGCTGCTTGATAATCTTTCAACA
CTTCAGCATGCCCCAAGTGTACAGTTCCAGGAGCGACCACCAGATACCGAATTACCTGAG
GCTGATGAAGATCAGGAGGATGCAGATTCAAGATGGGATCCTGATTCTGACACAAATGAT
GAAGACCGTAAGCCCATTCCTAGCAGAGTGAGGAGGGAAAATGTTGAACCTGAAGGAAAA
GGCGCGGAAGATATGAAAACAGAGGAGCGTCTAAGAGAAGTAGAGTCGACATTTGCAGAA
TCAACAAGCTTGAAGGGTGGCAATTCAGGTTCTGTAATGATAGATGGAGGACAAATTAAA
ATGGAACAAGGAAGCTCTAACAAGCCTTTTGATCAACCAGCTGATACTAATTCTTGA

Peptide Sequence

PEP ID

XP_016495680.1
PEP Infomation

PREDICTED: histone deacetylase 19-like [Nicotiana tabacum]
Sequence

MDTGGNSLPSGADGKKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMN
VLKPNPARDKDLCRFHADDYVAFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGFGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPPHEYYEYFGPDYTLHVAPSNMEN
KNSRQILEDIRSKLLDNLSTLQHAPSVQFQERPPDTELPEADEDQEDADSRWDPDSDTND
EDRKPIPSRVRRENVEPEGKGAEDMKTEERLREVESTFAESTSLKGGNSGSVMIDGGQIK
MEQGSSNKPFDQPADTNS

Transcript Sequence

Gene sequence data has not been registered.